No. words: 1664; after pruning: 1638


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.7 (1,1:777)  759  0.51 0.13 0.00  BF482977Ta14P088F09P095B121F1_036.ab1        1   778 (56)  C BF482977Ta14P088F09P095B121R1_036.ab1   (51)   779     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  376 nodes

 190 str. conn. components

Path
    1  C BF482977Ta14P088F09P095B121R1_036.ab1   830 
   70    BF482977Ta14P088F09P095B121F1_036.ab1    18 
   82  C BF482977Ta14P088F09P095B121R1_036.ab1   749 
   95    BF482977Ta14P088F09P095B121F1_036.ab1    43 
  119  C BF482977Ta14P088F09P095B121R1_036.ab1   712 
  129    BF482977Ta14P088F09P095B121F1_036.ab1    77 
  169  C BF482977Ta14P088F09P095B121R1_036.ab1   662 
  177    BF482977Ta14P088F09P095B121F1_036.ab1   125 
  201  C BF482977Ta14P088F09P095B121R1_036.ab1   630 
  205    BF482977Ta14P088F09P095B121F1_036.ab1   153 
  221  C BF482977Ta14P088F09P095B121R1_036.ab1   610 
  229    BF482977Ta14P088F09P095B121F1_036.ab1   177 
  237  C BF482977Ta14P088F09P095B121R1_036.ab1   594 
  241    BF482977Ta14P088F09P095B121F1_036.ab1   189 
  257  C BF482977Ta14P088F09P095B121R1_036.ab1   574 
  277    BF482977Ta14P088F09P095B121F1_036.ab1   225 
  285  C BF482977Ta14P088F09P095B121R1_036.ab1   546 
  301    BF482977Ta14P088F09P095B121F1_036.ab1   249 
  305  C BF482977Ta14P088F09P095B121R1_036.ab1   526 
  677    BF482977Ta14P088F09P095B121F1_036.ab1   625 
  689  C BF482977Ta14P088F09P095B121R1_036.ab1   142 
  697    BF482977Ta14P088F09P095B121F1_036.ab1   645 
  718  C BF482977Ta14P088F09P095B121R1_036.ab1   113 
  754    BF482977Ta14P088F09P095B121F1_036.ab1   702 
  758  C BF482977Ta14P088F09P095B121R1_036.ab1    73 
  786    BF482977Ta14P088F09P095B121F1_036.ab1   734 
  803  C BF482977Ta14P088F09P095B121R1_036.ab1    28 
  823    BF482977Ta14P088F09P095B121F1_036.ab1   771 
Contig length: old 886, new 886

Contig length: old 886, new 886
New start: 0