No. words: 1657; after pruning: 1631


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.1 (1,1:782)  771  0.00 0.13 0.13  BF482977Ta15P088F09P095B121F1_033.ab1        1   783 (47)  C BF482977Ta15P088F09P095B121R1_033.ab1   (44)   783     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  388 nodes

 196 str. conn. components

Path
    1  C BF482977Ta15P088F09P095B121R1_033.ab1   827 
   48    BF482977Ta15P088F09P095B121F1_033.ab1     4 
  415  C BF482977Ta15P088F09P095B121R1_033.ab1   412 
  691    BF482977Ta15P088F09P095B121F1_033.ab1   647 
  703  C BF482977Ta15P088F09P095B121R1_033.ab1   124 
  735    BF482977Ta15P088F09P095B121F1_033.ab1   691 
  739  C BF482977Ta15P088F09P095B121R1_033.ab1    88 
  775    BF482977Ta15P088F09P095B121F1_033.ab1   731 
  796  C BF482977Ta15P088F09P095B121R1_033.ab1    32 
  820    BF482977Ta15P088F09P095B121F1_033.ab1   776 
Contig length: old 874, new 874

Contig length: old 874, new 874
New start: 0