No. words: 1370; after pruning: 1344


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.1 (1,1:634)  631  0.00 0.00 0.00  BF482977Ta17P088H09P095B121F1_041.ab1        1   635 (50)  C BF482977Ta17P088H09P095B121R1_041.ab1   (50)   635     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  320 nodes

 162 str. conn. components

Path
    1  C BF482977Ta17P088H09P095B121R1_041.ab1   685 
   62    BF482977Ta17P088H09P095B121F1_041.ab1    12 
   66  C BF482977Ta17P088H09P095B121R1_041.ab1   620 
   74    BF482977Ta17P088H09P095B121F1_041.ab1    24 
  102  C BF482977Ta17P088H09P095B121R1_041.ab1   584 
  110    BF482977Ta17P088H09P095B121F1_041.ab1    60 
  134  C BF482977Ta17P088H09P095B121R1_041.ab1   552 
  550    BF482977Ta17P088H09P095B121F1_041.ab1   500 
  638  C BF482977Ta17P088H09P095B121R1_041.ab1    48 
  646    BF482977Ta17P088H09P095B121F1_041.ab1   596 
  650  C BF482977Ta17P088H09P095B121R1_041.ab1    36 
  670    BF482977Ta17P088H09P095B121F1_041.ab1   620 
Contig length: old 735, new 735

Contig length: old 735, new 735
New start: 0