No. words: 1630; after pruning: 1604


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 17.0 (1,1:784)  771  0.13 0.00 0.13  BF482977Ta19P052D09P027A091F1_027.ab1        2   785 (41)  C BF482977Ta19P052D09P027A091R1_027.ab1   (21)   783     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  386 nodes

 195 str. conn. components

Path
    1  C BF482977Ta19P052D09P027A091R1_027.ab1   804 
   29    BF482977Ta19P052D09P027A091F1_027.ab1     9 
  117  C BF482977Ta19P052D09P027A091R1_027.ab1   688 
  121    BF482977Ta19P052D09P027A091F1_027.ab1   101 
  569  C BF482977Ta19P052D09P027A091R1_027.ab1   236 
  593    BF482977Ta19P052D09P027A091F1_027.ab1   573 
  601  C BF482977Ta19P052D09P027A091R1_027.ab1   204 
  605    BF482977Ta19P052D09P027A091F1_027.ab1   585 
  617  C BF482977Ta19P052D09P027A091R1_027.ab1   188 
  629    BF482977Ta19P052D09P027A091F1_027.ab1   609 
  657  C BF482977Ta19P052D09P027A091R1_027.ab1   148 
  661    BF482977Ta19P052D09P027A091F1_027.ab1   641 
  677  C BF482977Ta19P052D09P027A091R1_027.ab1   128 
  681    BF482977Ta19P052D09P027A091F1_027.ab1   661 
  685  C BF482977Ta19P052D09P027A091R1_027.ab1   120 
  705    BF482977Ta19P052D09P027A091F1_027.ab1   685 
  713  C BF482977Ta19P052D09P027A091R1_027.ab1    92 
  721    BF482977Ta19P052D09P027A091F1_027.ab1   701 
  725  C BF482977Ta19P052D09P027A091R1_027.ab1    80 
  733    BF482977Ta19P052D09P027A091F1_027.ab1   713 
  737  C BF482977Ta19P052D09P027A091R1_027.ab1    68 
  789    BF482977Ta19P052D09P027A091F1_027.ab1   769 
Contig length: old 845, new 846

Contig length: old 846, new 846
New start: 0