No. words: 1386; after pruning: 1360


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.3 (1,1:650)  642  0.00 0.00 0.15  BF482977Ta19P088H09P095B121F1_039.ab1        1   651 (42)  C BF482977Ta19P088H09P095B121R1_039.ab1   (43)   650     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  324 nodes

 164 str. conn. components

Path
    1  C BF482977Ta19P088H09P095B121R1_039.ab1   693 
   63    BF482977Ta19P088H09P095B121F1_039.ab1    20 
   99  C BF482977Ta19P088H09P095B121R1_039.ab1   595 
  111    BF482977Ta19P088H09P095B121F1_039.ab1    68 
  135  C BF482977Ta19P088H09P095B121R1_039.ab1   559 
  547    BF482977Ta19P088H09P095B121F1_039.ab1   504 
  615  C BF482977Ta19P088H09P095B121R1_039.ab1    79 
  619    BF482977Ta19P088H09P095B121F1_039.ab1   576 
  639  C BF482977Ta19P088H09P095B121R1_039.ab1    55 
  647    BF482977Ta19P088H09P095B121F1_039.ab1   604 
  651  C BF482977Ta19P088H09P095B121R1_039.ab1    43 
  671    BF482977Ta19P088H09P095B121F1_039.ab1   628 
Contig length: old 735, new 736

Contig length: old 736, new 736
New start: 0