No. words: 1520; after pruning: 1494


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.2 (1,1:757)  685  0.00 0.00 0.14  BF482977Ta21P052D09P027A091F1_023.ab1       65   759 (67)  C BF482977Ta21P052D09P027A091R1_023.ab1   (0)   694     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  346 nodes

 175 str. conn. components

Path
    1    BF482977Ta21P052D09P027A091F1_023.ab1     1 
   96  C BF482977Ta21P052D09P027A091R1_023.ab1   663 
  104    BF482977Ta21P052D09P027A091F1_023.ab1   104 
  144  C BF482977Ta21P052D09P027A091R1_023.ab1   615 
  156    BF482977Ta21P052D09P027A091F1_023.ab1   156 
  160  C BF482977Ta21P052D09P027A091R1_023.ab1   599 
  168    BF482977Ta21P052D09P027A091F1_023.ab1   168 
  216  C BF482977Ta21P052D09P027A091R1_023.ab1   543 
  220    BF482977Ta21P052D09P027A091F1_023.ab1   220 
  240  C BF482977Ta21P052D09P027A091R1_023.ab1   519 
  260    BF482977Ta21P052D09P027A091F1_023.ab1   260 
  276  C BF482977Ta21P052D09P027A091R1_023.ab1   483 
  280    BF482977Ta21P052D09P027A091F1_023.ab1   280 
  292  C BF482977Ta21P052D09P027A091R1_023.ab1   467 
  300    BF482977Ta21P052D09P027A091F1_023.ab1   300 
  312  C BF482977Ta21P052D09P027A091R1_023.ab1   447 
  320    BF482977Ta21P052D09P027A091F1_023.ab1   320 
  384  C BF482977Ta21P052D09P027A091R1_023.ab1   375 
  388    BF482977Ta21P052D09P027A091F1_023.ab1   388 
  424  C BF482977Ta21P052D09P027A091R1_023.ab1   335 
  432    BF482977Ta21P052D09P027A091F1_023.ab1   432 
  488  C BF482977Ta21P052D09P027A091R1_023.ab1   271 
  512    BF482977Ta21P052D09P027A091F1_023.ab1   512 
  584  C BF482977Ta21P052D09P027A091R1_023.ab1   175 
  588    BF482977Ta21P052D09P027A091F1_023.ab1   588 
  600  C BF482977Ta21P052D09P027A091R1_023.ab1   159 
  608    BF482977Ta21P052D09P027A091F1_023.ab1   608 
  636  C BF482977Ta21P052D09P027A091R1_023.ab1   123 
  640    BF482977Ta21P052D09P027A091F1_023.ab1   640 
  668  C BF482977Ta21P052D09P027A091R1_023.ab1    91 
  672    BF482977Ta21P052D09P027A091F1_023.ab1   672 
  676  C BF482977Ta21P052D09P027A091R1_023.ab1    83 
  692    BF482977Ta21P052D09P027A091F1_023.ab1   692 
  724  C BF482977Ta21P052D09P027A091R1_023.ab1    35 
  728    BF482977Ta21P052D09P027A091F1_023.ab1   728 
Contig length: old 826, new 826

Contig length: old 826, new 826
New start: 0