No. words: 1678; after pruning: 1652


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.3 (1,1:782)  776  0.00 0.13 0.00  BF482977Td01P088F09P095B121F1_047.ab1        1   783 (46)  C BF482977Td01P088F09P095B121R1_047.ab1   (65)   784     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  390 nodes

 197 str. conn. components

Path
    1  C BF482977Td01P088F09P095B121R1_047.ab1   849 
   69    BF482977Td01P088F09P095B121F1_047.ab1     4 
   73  C BF482977Td01P088F09P095B121R1_047.ab1   777 
   85    BF482977Td01P088F09P095B121F1_047.ab1    19 
  137  C BF482977Td01P088F09P095B121R1_047.ab1   713 
  141    BF482977Td01P088F09P095B121F1_047.ab1    75 
  161  C BF482977Td01P088F09P095B121R1_047.ab1   689 
  165    BF482977Td01P088F09P095B121F1_047.ab1    99 
  705  C BF482977Td01P088F09P095B121R1_047.ab1   145 
  713    BF482977Td01P088F09P095B121F1_047.ab1   647 
  741  C BF482977Td01P088F09P095B121R1_047.ab1   109 
  809    BF482977Td01P088F09P095B121F1_047.ab1   743 
  813  C BF482977Td01P088F09P095B121R1_047.ab1    37 
  845    BF482977Td01P088F09P095B121F1_047.ab1   779 
Contig length: old 895, new 895

Contig length: old 895, new 895
New start: 0