No. words: 1666; after pruning: 1640


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.3 (1,1:782)  776  0.00 0.13 0.00  BF482977Td04P088F09P095B121F1_046.ab1        1   783 (47)  C BF482977Td04P088F09P095B121R1_046.ab1   (52)   784     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  390 nodes

 197 str. conn. components

Path
    1  C BF482977Td04P088F09P095B121R1_046.ab1   836 
   56    BF482977Td04P088F09P095B121F1_046.ab1     4 
   60  C BF482977Td04P088F09P095B121R1_046.ab1   777 
   72    BF482977Td04P088F09P095B121F1_046.ab1    19 
   84  C BF482977Td04P088F09P095B121R1_046.ab1   753 
   88    BF482977Td04P088F09P095B121F1_046.ab1    35 
  672  C BF482977Td04P088F09P095B121R1_046.ab1   165 
  796    BF482977Td04P088F09P095B121F1_046.ab1   743 
  800  C BF482977Td04P088F09P095B121R1_046.ab1    37 
  832    BF482977Td04P088F09P095B121F1_046.ab1   779 
Contig length: old 883, new 883

Contig length: old 883, new 883
New start: 0