No. words: 1657; after pruning: 1631


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.2 (1,1:778)  772  0.00 0.13 0.00  BF482977Td07P088F09P095B121F1_041.ab1        1   779 (48)  C BF482977Td07P088F09P095B121R1_041.ab1   (50)   780     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  388 nodes

 196 str. conn. components

Path
    1  C BF482977Td07P088F09P095B121R1_041.ab1   830 
   54    BF482977Td07P088F09P095B121F1_041.ab1     4 
   58  C BF482977Td07P088F09P095B121R1_041.ab1   773 
   70    BF482977Td07P088F09P095B121F1_041.ab1    19 
   82  C BF482977Td07P088F09P095B121R1_041.ab1   749 
   86    BF482977Td07P088F09P095B121F1_041.ab1    35 
  258  C BF482977Td07P088F09P095B121R1_041.ab1   573 
  302    BF482977Td07P088F09P095B121F1_041.ab1   251 
  462  C BF482977Td07P088F09P095B121R1_041.ab1   369 
  754    BF482977Td07P088F09P095B121F1_041.ab1   703 
  758  C BF482977Td07P088F09P095B121R1_041.ab1    73 
  786    BF482977Td07P088F09P095B121F1_041.ab1   735 
  806  C BF482977Td07P088F09P095B121R1_041.ab1    25 
  822    BF482977Td07P088F09P095B121F1_041.ab1   771 
Contig length: old 878, new 878

Contig length: old 878, new 878
New start: 0