No. words: 1658; after pruning: 1618


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.9 (1,1:913)  711  0.14 0.00 0.00  BF482977Tu01P027A03P027A091F1_095.ab1      198   914 (27)  C BF482977Tu01P027A03P027A091R1_095.ab1   (0)   717     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  356 nodes

 180 str. conn. components

Path
    1    BF482977Tu01P027A03P027A091F1_095.ab1     1 
  385  C BF482977Tu01P027A03P027A091R1_095.ab1   530 
  876    BF482977Tu01P027A03P027A091F1_095.ab1   876 
  880  C BF482977Tu01P027A03P027A091R1_095.ab1    35 
  908    BF482977Tu01P027A03P027A091F1_095.ab1   908 
Contig length: old 941, new 941

Contig length: old 941, new 941
New start: 0