No. words: 1688; after pruning: 1648


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.3 (1,1:1282)  388  0.49 0.00 0.49  BF483101At02P003D03D09F1_078.ab1      454   859 (0)  C BF483101At02P003D03D09R1_078.ab1   (0)   829   426 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  194 nodes

 99 str. conn. components

Path
    1    BF483101At02P003D03D09F1_078.ab1     1 
  617  C BF483101At02P003D03D09R1_078.ab1   667 
  625    BF483101At02P003D03D09F1_078.ab1   625 
  649  C BF483101At02P003D03D09R1_078.ab1   635 
  673    BF483101At02P003D03D09F1_078.ab1   673 
  689  C BF483101At02P003D03D09R1_078.ab1   595 
Contig length: old 1283, new 1283

Contig length: old 1283, new 1283
New start: 0