No. words: 931; after pruning: 905


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.4 (1,1:286)  265  1.05 0.70 0.00  BF483299Ld02P078E06P078E121F1_074.ab1        1   286 (169)  C BF483299Ld02P078E06P078E121R1_074.ab1   (188)   288     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  132 nodes

 68 str. conn. components

Path
    1  C BF483299Ld02P078E06P078E121R1_074.ab1   476 
  318    BF483299Ld02P078E06P078E121F1_074.ab1   128 
  322  C BF483299Ld02P078E06P078E121R1_074.ab1   155 
  342    BF483299Ld02P078E06P078E121F1_074.ab1   152 
  354  C BF483299Ld02P078E06P078E121R1_074.ab1   123 
  362    BF483299Ld02P078E06P078E121F1_074.ab1   172 
  370  C BF483299Ld02P078E06P078E121R1_074.ab1   107 
  382    BF483299Ld02P078E06P078E121F1_074.ab1   192 
  386  C BF483299Ld02P078E06P078E121R1_074.ab1    91 
  390    BF483299Ld02P078E06P078E121F1_074.ab1   200 
Contig length: old 644, new 645

Contig length: old 645, new 645
New start: 0