No. words: 914; after pruning: 888


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 4.4 (1,1:290)  274  0.00 0.35 0.35  BF483299Ld10P078E06P078E121F1_089.ab1        3   291 (179)  C BF483299Ld10P078E06P078E121R1_089.ab1   (155)   289     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  140 nodes

 72 str. conn. components

Path
    1  C BF483299Ld10P078E06P078E121R1_089.ab1   444 
  242    BF483299Ld10P078E06P078E121F1_089.ab1    88 
  246  C BF483299Ld10P078E06P078E121R1_089.ab1   199 
  274    BF483299Ld10P078E06P078E121F1_089.ab1   120 
  282  C BF483299Ld10P078E06P078E121R1_089.ab1   163 
  302    BF483299Ld10P078E06P078E121F1_089.ab1   148 
Contig length: old 623, new 624

Contig length: old 624, new 624
New start: 0