No. words: 928; after pruning: 902


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 5.5 (1,1:294)  275  1.02 0.34 0.00  BF483299Ld12P078E06P078E121F1_092.ab1        1   294 (163)  C BF483299Ld12P078E06P078E121R1_092.ab1   (175)   296     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  142 nodes

 73 str. conn. components

Path
    1  C BF483299Ld12P078E06P078E121R1_092.ab1   471 
  334    BF483299Ld12P078E06P078E121F1_092.ab1   158 
  374  C BF483299Ld12P078E06P078E121R1_092.ab1    98 
  378    BF483299Ld12P078E06P078E121F1_092.ab1   202 
  410  C BF483299Ld12P078E06P078E121R1_092.ab1    62 
  414    BF483299Ld12P078E06P078E121F1_092.ab1   238 
Contig length: old 633, new 633

Contig length: old 633, new 633
New start: 0