No. words: 415; after pruning: 389


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -0.4 -0.4 (1,1:148)  129  1.34 1.34 0.67  BF483299Sn27P078E06P101B121F1_095.ab1        1   149 (59)  C BF483299Sn27P078E06P101B121R1_095.ab1   (57)   150     1 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.4       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  64 nodes

 34 str. conn. components

Path
    1  C BF483299Sn27P078E06P101B121R1_095.ab1   207 
  130    BF483299Sn27P078E06P101B121F1_095.ab1    71 
  138  C BF483299Sn27P078E06P101B121R1_095.ab1    70 
  142    BF483299Sn27P078E06P101B121F1_095.ab1    83 
  154  C BF483299Sn27P078E06P101B121R1_095.ab1    54 
  162    BF483299Sn27P078E06P101B121F1_095.ab1   103 
Contig length: old 266, new 267

Contig length: old 267, new 267
New start: 0