No. words: 289; after pruning: 263


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    4   -0.2 -0.2 (1,1:93)   80  0.00 0.00 1.11  BF483299Ta13P137H07P078E121F1_003.ab1        1    90 (54)  C BF483299Ta13P137H07P078E121R1_003.ab1   (52)    93     5 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.2       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  44 nodes

 24 str. conn. components

Path
    1  C BF483299Ta13P137H07P078E121R1_003.ab1   145 
   84    BF483299Ta13P137H07P078E121F1_003.ab1    32 
   88  C BF483299Ta13P137H07P078E121R1_003.ab1    58 
  100    BF483299Ta13P137H07P078E121F1_003.ab1    48 
  104  C BF483299Ta13P137H07P078E121R1_003.ab1    42 
  108    BF483299Ta13P137H07P078E121F1_003.ab1    56 
Contig length: old 195, new 196

Contig length: old 196, new 196
New start: 0