No. words: 836; after pruning: 784


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      4

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.5 (1,1:7)  202  0.48 0.00 0.00  BF483299Ta19P078E06P101B121R1_055.ab1        8   215 (0)    BF483299Ta19P078E06P101B121R1_071.ab1        1   208 (0) *
Merge:(0)    0    0.0 2.9 (1,1:-1)  191  1.46 0.49 0.00  BF483299Ta19P078E06P101B121F1_055.ab1        1   206 (0)    BF483299Ta19P078E06P101B121F1_071.ab1        1   207 (0) *
Merge:(0)    6   -1.7 2.1 (2,2:156)  138  0.66 0.66 0.66  BF483299Ta19P078E06P101B121F1_071.ab1        1   151 (56)  C BF483299Ta19P078E06P101B121R1_071.ab1   (57)   151     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    4      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       2        0
-1.7       1        0

Gap   # merges  # failures
 size
 0       2        0
 6       1        0

Offset
  0       6 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    4      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    4    1

Chimera merges: 


Contig 1:  452 nodes

 115 str. conn. components

Path
    1  C BF483299Ta19P078E06P101B121R1_055.ab1   215 
  109    BF483299Ta19P078E06P101B121F1_071.ab1    51 
  111  C BF483299Ta19P078E06P101B121R1_055.ab1   105 
  135    BF483299Ta19P078E06P101B121F1_055.ab1    76 
  139  C BF483299Ta19P078E06P101B121R1_055.ab1    77 
  147    BF483299Ta19P078E06P101B121F1_071.ab1    89 
  151  C BF483299Ta19P078E06P101B121R1_071.ab1    58 
  159  C BF483299Ta19P078E06P101B121R1_055.ab1    57 
  165    BF483299Ta19P078E06P101B121F1_071.ab1   107 
  191    BF483299Ta19P078E06P101B121F1_055.ab1   132 
  243    BF483299Ta19P078E06P101B121F1_071.ab1   185 
  259    BF483299Ta19P078E06P101B121F1_055.ab1   200 
Contig length: old 264, new 265

Contig length: old 265, new 265
New start: 0