No. words: 1489; after pruning: 1463


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.2 (1,1:940)  530  0.00 0.00 0.00  BF483494As01P027C03P027C091F1_069.ab1      198   745 (0)  C BF483494As01P027C03P027C091R1_069.ab1   (0)   744   197 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  276 nodes

 140 str. conn. components

Path
    1    BF483494As01P027C03P027C091F1_069.ab1     1 
  537  C BF483494As01P027C03P027C091R1_069.ab1   405 
  541    BF483494As01P027C03P027C091F1_069.ab1   541 
  573  C BF483494As01P027C03P027C091R1_069.ab1   369 
  585    BF483494As01P027C03P027C091F1_069.ab1   585 
  589  C BF483494As01P027C03P027C091R1_069.ab1   353 
  613    BF483494As01P027C03P027C091F1_069.ab1   613 
  621  C BF483494As01P027C03P027C091R1_069.ab1   321 
  665    BF483494As01P027C03P027C091F1_069.ab1   665 
  669  C BF483494As01P027C03P027C091R1_069.ab1   273 
Contig length: old 941, new 941

Contig length: old 941, new 941
New start: 0