No. words: 1605; after pruning: 1579


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.5 (1,1:949)  637  0.00 0.00 0.00  BF483494As02P027C03P027C091F1_067.ab1      160   814 (0)  C BF483494As02P027C03P027C091R1_067.ab1   (0)   791   137 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  330 nodes

 167 str. conn. components

Path
    1    BF483494As02P027C03P027C091F1_067.ab1     1 
  499  C BF483494As02P027C03P027C091R1_067.ab1   452 
  503    BF483494As02P027C03P027C091F1_067.ab1   503 
  583  C BF483494As02P027C03P027C091R1_067.ab1   368 
  587    BF483494As02P027C03P027C091F1_067.ab1   587 
  611  C BF483494As02P027C03P027C091R1_067.ab1   340 
  619    BF483494As02P027C03P027C091F1_067.ab1   619 
  635  C BF483494As02P027C03P027C091R1_067.ab1   316 
  647    BF483494As02P027C03P027C091F1_067.ab1   647 
  651  C BF483494As02P027C03P027C091R1_067.ab1   300 
  663    BF483494As02P027C03P027C091F1_067.ab1   663 
  667  C BF483494As02P027C03P027C091R1_067.ab1   284 
  675    BF483494As02P027C03P027C091F1_067.ab1   675 
  679  C BF483494As02P027C03P027C091R1_067.ab1   272 
Contig length: old 950, new 950

Contig length: old 950, new 950
New start: 0