No. words: 1674; after pruning: 1648


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.0 (1,1:975)  664  0.43 0.00 0.00  BF483494At01P027C03P027C091F1_065.ab1      127   824 (0)  C BF483494At01P027C03P027C091R1_065.ab1   (0)   850   153 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  346 nodes

 175 str. conn. components

Path
    1    BF483494At01P027C03P027C091F1_065.ab1     1 
  203  C BF483494At01P027C03P027C091R1_065.ab1   774 
  207    BF483494At01P027C03P027C091F1_065.ab1   207 
  215  C BF483494At01P027C03P027C091R1_065.ab1   762 
  219    BF483494At01P027C03P027C091F1_065.ab1   219 
  255  C BF483494At01P027C03P027C091R1_065.ab1   722 
  259    BF483494At01P027C03P027C091F1_065.ab1   259 
  283  C BF483494At01P027C03P027C091R1_065.ab1   694 
  287    BF483494At01P027C03P027C091F1_065.ab1   287 
  291  C BF483494At01P027C03P027C091R1_065.ab1   686 
  295    BF483494At01P027C03P027C091F1_065.ab1   295 
  411  C BF483494At01P027C03P027C091R1_065.ab1   566 
  419    BF483494At01P027C03P027C091F1_065.ab1   419 
  463  C BF483494At01P027C03P027C091R1_065.ab1   514 
  475    BF483494At01P027C03P027C091F1_065.ab1   475 
  479  C BF483494At01P027C03P027C091R1_065.ab1   498 
  507    BF483494At01P027C03P027C091F1_065.ab1   507 
  511  C BF483494At01P027C03P027C091R1_065.ab1   466 
  523    BF483494At01P027C03P027C091F1_065.ab1   523 
  527  C BF483494At01P027C03P027C091R1_065.ab1   450 
  543    BF483494At01P027C03P027C091F1_065.ab1   543 
  547  C BF483494At01P027C03P027C091R1_065.ab1   430 
  551    BF483494At01P027C03P027C091F1_065.ab1   551 
  555  C BF483494At01P027C03P027C091R1_065.ab1   422 
  619    BF483494At01P027C03P027C091F1_065.ab1   619 
  623  C BF483494At01P027C03P027C091R1_065.ab1   354 
  655    BF483494At01P027C03P027C091F1_065.ab1   655 
  659  C BF483494At01P027C03P027C091R1_065.ab1   318 
  719    BF483494At01P027C03P027C091F1_065.ab1   719 
  723  C BF483494At01P027C03P027C091R1_065.ab1   254 
Contig length: old 976, new 976

Contig length: old 976, new 976
New start: 0