No. words: 1678; after pruning: 1652


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.6 (1,1:973)  680  0.00 0.00 0.00  BF483494At02P027C03P027C091F1_080.ab1      114   817 (0)  C BF483494At02P027C03P027C091R1_080.ab1   (0)   861   158 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  354 nodes

 179 str. conn. components

Path
    1    BF483494At02P027C03P027C091F1_080.ab1     1 
  421  C BF483494At02P027C03P027C091R1_080.ab1   554 
  425    BF483494At02P027C03P027C091F1_080.ab1   425 
  461  C BF483494At02P027C03P027C091R1_080.ab1   514 
  481    BF483494At02P027C03P027C091F1_080.ab1   481 
  493  C BF483494At02P027C03P027C091R1_080.ab1   482 
  517    BF483494At02P027C03P027C091F1_080.ab1   517 
  525  C BF483494At02P027C03P027C091R1_080.ab1   450 
  537    BF483494At02P027C03P027C091F1_080.ab1   537 
  545  C BF483494At02P027C03P027C091R1_080.ab1   430 
  613    BF483494At02P027C03P027C091F1_080.ab1   613 
  621  C BF483494At02P027C03P027C091R1_080.ab1   354 
Contig length: old 974, new 974

Contig length: old 974, new 974
New start: 0