No. words: 1707; after pruning: 1681


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 16.3 (1,1:953)  734  0.00 0.00 0.00  BF483494Ld06P027C03P027C091F1_088.ab1      107   858 (1)  C BF483494Ld06P027C03P027C091R1_088.ab1   (0)   848    97 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  378 nodes

 191 str. conn. components

Path
    1    BF483494Ld06P027C03P027C091F1_088.ab1     1 
  422  C BF483494Ld06P027C03P027C091R1_088.ab1   533 
  446    BF483494Ld06P027C03P027C091F1_088.ab1   446 
  614  C BF483494Ld06P027C03P027C091R1_088.ab1   341 
  626    BF483494Ld06P027C03P027C091F1_088.ab1   626 
  630  C BF483494Ld06P027C03P027C091R1_088.ab1   325 
Contig length: old 954, new 954

Contig length: old 954, new 954
New start: 0