No. words: 909; after pruning: 883


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 2.1 (1,1:300)  287  0.33 0.33 0.33  BF483494Ld08P027D03P027D091F1_038.ab1        1   300 (138)  C BF483494Ld08P027D03P027D091R1_038.ab1   (170)   301     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  142 nodes

 73 str. conn. components

Path
    1  C BF483494Ld08P027D03P027D091R1_038.ab1   471 
  218    BF483494Ld08P027D03P027D091F1_038.ab1    47 
  226  C BF483494Ld08P027D03P027D091R1_038.ab1   246 
  246    BF483494Ld08P027D03P027D091F1_038.ab1    75 
  262  C BF483494Ld08P027D03P027D091R1_038.ab1   210 
  274    BF483494Ld08P027D03P027D091F1_038.ab1   103 
  286  C BF483494Ld08P027D03P027D091R1_038.ab1   186 
  294    BF483494Ld08P027D03P027D091F1_038.ab1   123 
  326  C BF483494Ld08P027D03P027D091R1_038.ab1   146 
  338    BF483494Ld08P027D03P027D091F1_038.ab1   167 
Contig length: old 608, new 609

Contig length: old 609, new 609
New start: 0