No. words: 1551; after pruning: 1525


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.8 (1,1:976)  541  0.70 0.00 0.00  BF483494Tu02P027C03P027C091F1_071.ab1      259   832 (0)  C BF483494Tu02P027C03P027C091R1_071.ab1   (0)   719   146 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  278 nodes

 141 str. conn. components

Path
    1    BF483494Tu02P027C03P027C091F1_071.ab1     1 
  601  C BF483494Tu02P027C03P027C091R1_071.ab1   377 
  605    BF483494Tu02P027C03P027C091F1_071.ab1   605 
  645  C BF483494Tu02P027C03P027C091R1_071.ab1   333 
  657    BF483494Tu02P027C03P027C091F1_071.ab1   657 
  661  C BF483494Tu02P027C03P027C091R1_071.ab1   317 
  705    BF483494Tu02P027C03P027C091F1_071.ab1   705 
  709  C BF483494Tu02P027C03P027C091R1_071.ab1   269 
  713    BF483494Tu02P027C03P027C091F1_071.ab1   713 
  717  C BF483494Tu02P027C03P027C091R1_071.ab1   261 
Contig length: old 977, new 977

Contig length: old 977, new 977
New start: 0