No. words: 1202; after pruning: 1176


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.3 (1,1:854)  334  0.29 0.00 0.00  BF483498At01P081F01P081F071F1_020.ab1      237   583 (0)  C BF483498At01P081F01P081F071R1_020.ab1   (0)   619   273 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  170 nodes

 87 str. conn. components

Path
    1    BF483498At01P081F01P081F071F1_020.ab1     1 
  372  C BF483498At01P081F01P081F071R1_020.ab1   484 
  376    BF483498At01P081F01P081F071F1_020.ab1   376 
  384  C BF483498At01P081F01P081F071R1_020.ab1   472 
  388    BF483498At01P081F01P081F071F1_020.ab1   388 
  404  C BF483498At01P081F01P081F071R1_020.ab1   452 
  416    BF483498At01P081F01P081F071F1_020.ab1   416 
  420  C BF483498At01P081F01P081F071R1_020.ab1   436 
  436    BF483498At01P081F01P081F071F1_020.ab1   436 
  444  C BF483498At01P081F01P081F071R1_020.ab1   412 
  460    BF483498At01P081F01P081F071F1_020.ab1   460 
  464  C BF483498At01P081F01P081F071R1_020.ab1   392 
Contig length: old 855, new 855

Contig length: old 855, new 855
New start: 0