No. words: 1480; after pruning: 1454


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.9 (1,1:855)  609  0.00 0.00 0.00  BF483498At02P081F01P081F071F1_018.ab1       90   713 (0)  C BF483498At02P081F01P081F071R1_018.ab1   (0)   767   144 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  314 nodes

 159 str. conn. components

Path
    1    BF483498At02P081F01P081F071F1_018.ab1     1 
  533  C BF483498At02P081F01P081F071R1_018.ab1   324 
  537    BF483498At02P081F01P081F071F1_018.ab1   537 
  549  C BF483498At02P081F01P081F071R1_018.ab1   308 
  561    BF483498At02P081F01P081F071F1_018.ab1   561 
  569  C BF483498At02P081F01P081F071R1_018.ab1   288 
  601    BF483498At02P081F01P081F071F1_018.ab1   601 
  605  C BF483498At02P081F01P081F071R1_018.ab1   252 
Contig length: old 856, new 856

Contig length: old 856, new 856
New start: 0