No. words: 1706; after pruning: 1680


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 15.1 (1,1:880)  780  0.37 0.12 0.12  BF483498Ld02P081F01P081F071F1_087.ab1       49   869 (4)  C BF483498Ld02P081F01P081F071R1_087.ab1   (0)   833    13 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  404 nodes

 204 str. conn. components

Path
    1    BF483498Ld02P081F01P081F071F1_087.ab1     1 
  600  C BF483498Ld02P081F01P081F071R1_087.ab1   282 
Contig length: old 881, new 881

Contig length: old 881, new 881
New start: 0