No. words: 1590; after pruning: 1564


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.7 (1,1:880)  689  0.00 0.00 0.00  BF483498Ld06P081F01P081F071F1_005.ab1       91   799 (0)  C BF483498Ld06P081F01P081F071R1_005.ab1   (0)   791    83 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  356 nodes

 180 str. conn. components

Path
    1    BF483498Ld06P081F01P081F071F1_005.ab1     1 
  438  C BF483498Ld06P081F01P081F071R1_005.ab1   444 
  454    BF483498Ld06P081F01P081F071F1_005.ab1   454 
  458  C BF483498Ld06P081F01P081F071R1_005.ab1   424 
  474    BF483498Ld06P081F01P081F071F1_005.ab1   474 
  494  C BF483498Ld06P081F01P081F071R1_005.ab1   388 
Contig length: old 881, new 881

Contig length: old 881, new 881
New start: 0