No. words: 1678; after pruning: 1652


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.4 (1,1:867)  773  0.00 0.12 0.00  BF483498Ld08P081F01P081F071F1_017.ab1        1   800 (0)  C BF483498Ld08P081F01P081F071R1_017.ab1   (9)   869    69 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  398 nodes

 201 str. conn. components

Path
    1  C BF483498Ld08P081F01P081F071R1_017.ab1   878 
   13    BF483498Ld08P081F01P081F071F1_017.ab1     4 
  574  C BF483498Ld08P081F01P081F071R1_017.ab1   304 
Contig length: old 878, new 877

Contig length: old 877, new 878
New start: 0 
I Change at: 20; seg lengths: entry 1, contig 0