No. words: 1709; after pruning: 1683


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.4 (1,1:873)  796  0.00 0.12 0.00  BF483498Ld10P081F01P081F071F1_034.ab1        1   825 (0)  C BF483498Ld10P081F01P081F071R1_034.ab1   (9)   875    50 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  412 nodes

 208 str. conn. components

Path
    1  C BF483498Ld10P081F01P081F071R1_034.ab1   884 
   13    BF483498Ld10P081F01P081F071F1_034.ab1     4 
  638  C BF483498Ld10P081F01P081F071R1_034.ab1   246 
Contig length: old 884, new 883

Contig length: old 883, new 884
New start: 0 
I Change at: 20; seg lengths: entry 1, contig 0