No. words: 1636; after pruning: 1610


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.0 (1,1:782)  756  0.26 0.00 0.00  BF483498Sn27P108G08P081F071F1_096.ab1        1   783 (45)  C BF483498Sn27P108G08P081F071R1_096.ab1   (25)   783     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  386 nodes

 195 str. conn. components

Path
    1  C BF483498Sn27P108G08P081F071R1_096.ab1   808 
   33    BF483498Sn27P108G08P081F071F1_096.ab1     8 
   45  C BF483498Sn27P108G08P081F071R1_096.ab1   764 
   72    BF483498Sn27P108G08P081F071F1_096.ab1    47 
  104  C BF483498Sn27P108G08P081F071R1_096.ab1   705 
  108    BF483498Sn27P108G08P081F071F1_096.ab1    83 
  192  C BF483498Sn27P108G08P081F071R1_096.ab1   617 
  196    BF483498Sn27P108G08P081F071F1_096.ab1   171 
  564  C BF483498Sn27P108G08P081F071R1_096.ab1   245 
  772    BF483498Sn27P108G08P081F071F1_096.ab1   747 
  782  C BF483498Sn27P108G08P081F071R1_096.ab1    27 
  802    BF483498Sn27P108G08P081F071F1_096.ab1   777 
Contig length: old 853, new 853

Contig length: old 853, new 853
New start: 0