No. words: 1608; after pruning: 1582


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.8 (1,1:786)  746  0.51 0.00 0.00  BF483498Sn28P108G08P081F071F1_090.ab1        1   779 (0)  C BF483498Sn28P108G08P081F071R1_090.ab1   (42)   787     9 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  384 nodes

 194 str. conn. components

Path
    1  C BF483498Sn28P108G08P081F071R1_090.ab1   829 
   46    BF483498Sn28P108G08P081F071F1_090.ab1     4 
   66  C BF483498Sn28P108G08P081F071R1_090.ab1   764 
   74    BF483498Sn28P108G08P081F071F1_090.ab1    32 
   78  C BF483498Sn28P108G08P081F071R1_090.ab1   752 
   93    BF483498Sn28P108G08P081F071F1_090.ab1    51 
  121  C BF483498Sn28P108G08P081F071R1_090.ab1   709 
  139    BF483498Sn28P108G08P081F071F1_090.ab1    97 
  587  C BF483498Sn28P108G08P081F071R1_090.ab1   243 
Contig length: old 829, new 829

Contig length: old 829, new 829
New start: 0