No. words: 1665; after pruning: 1639


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.5 (1,1:791)  769  0.13 0.00 0.00  BF483498Sn29P108G08P081F071F1_094.ab1        1   792 (43)  C BF483498Sn29P108G08P081F071R1_094.ab1   (38)   792     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  394 nodes

 199 str. conn. components

Path
    1  C BF483498Sn29P108G08P081F071R1_094.ab1   830 
   42    BF483498Sn29P108G08P081F071F1_094.ab1     4 
   46  C BF483498Sn29P108G08P081F071R1_094.ab1   785 
   58    BF483498Sn29P108G08P081F071F1_094.ab1    20 
   66  C BF483498Sn29P108G08P081F071R1_094.ab1   765 
   70    BF483498Sn29P108G08P081F071F1_094.ab1    32 
   78  C BF483498Sn29P108G08P081F071R1_094.ab1   753 
   88    BF483498Sn29P108G08P081F071F1_094.ab1    50 
  124  C BF483498Sn29P108G08P081F071R1_094.ab1   707 
  128    BF483498Sn29P108G08P081F071F1_094.ab1    90 
  584  C BF483498Sn29P108G08P081F071R1_094.ab1   247 
  824    BF483498Sn29P108G08P081F071F1_094.ab1   786 
Contig length: old 873, new 873

Contig length: old 873, new 873
New start: 0