No. words: 1663; after pruning: 1637


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.5 (1,1:786)  767  0.00 0.00 0.00  BF483498Sn30P108G08P081F071F1_088.ab1        1   787 (47)  C BF483498Sn30P108G08P081F071R1_088.ab1   (42)   787     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  396 nodes

 200 str. conn. components

Path
    1  C BF483498Sn30P108G08P081F071R1_088.ab1   829 
   58    BF483498Sn30P108G08P081F071F1_088.ab1    16 
   62  C BF483498Sn30P108G08P081F071R1_088.ab1   768 
   78    BF483498Sn30P108G08P081F071F1_088.ab1    36 
   86  C BF483498Sn30P108G08P081F071R1_088.ab1   744 
   90    BF483498Sn30P108G08P081F071F1_088.ab1    48 
  134  C BF483498Sn30P108G08P081F071R1_088.ab1   696 
  138    BF483498Sn30P108G08P081F071F1_088.ab1    96 
  142  C BF483498Sn30P108G08P081F071R1_088.ab1   688 
  146    BF483498Sn30P108G08P081F071F1_088.ab1   104 
  150  C BF483498Sn30P108G08P081F071R1_088.ab1   680 
  154    BF483498Sn30P108G08P081F071F1_088.ab1   112 
  586  C BF483498Sn30P108G08P081F071R1_088.ab1   244 
  694    BF483498Sn30P108G08P081F071F1_088.ab1   652 
  698  C BF483498Sn30P108G08P081F071R1_088.ab1   132 
  790    BF483498Sn30P108G08P081F071F1_088.ab1   748 
  802  C BF483498Sn30P108G08P081F071R1_088.ab1    28 
  814    BF483498Sn30P108G08P081F071F1_088.ab1   772 
  822  C BF483498Sn30P108G08P081F071R1_088.ab1     8 
  826    BF483498Sn30P108G08P081F071F1_088.ab1   784 
Contig length: old 876, new 876

Contig length: old 876, new 876
New start: 0