No. words: 1633; after pruning: 1607


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.2 (1,1:785)  756  0.25 0.13 0.00  BF483498Ta16P108G08P081F071F1_091.ab1        1   786 (28)  C BF483498Ta16P108G08P081F071R1_091.ab1   (32)   787     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  386 nodes

 195 str. conn. components

Path
    1  C BF483498Ta16P108G08P081F071R1_091.ab1   819 
   36    BF483498Ta16P108G08P081F071F1_091.ab1     4 
   40  C BF483498Ta16P108G08P081F071R1_091.ab1   780 
   51    BF483498Ta16P108G08P081F071F1_091.ab1    18 
   71  C BF483498Ta16P108G08P081F071R1_091.ab1   749 
   83    BF483498Ta16P108G08P081F071F1_091.ab1    50 
  111  C BF483498Ta16P108G08P081F071R1_091.ab1   709 
  129    BF483498Ta16P108G08P081F071F1_091.ab1    96 
  577  C BF483498Ta16P108G08P081F071R1_091.ab1   243 
  813    BF483498Ta16P108G08P081F071F1_091.ab1   780 
Contig length: old 847, new 847

Contig length: old 847, new 847
New start: 0