No. words: 1671; after pruning: 1645


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.8 (1,1:799)  780  0.00 0.00 0.00  BF483498Ta19P108G08P081F071F1_072.ab1        1   800 (36)  C BF483498Ta19P108G08P081F071R1_072.ab1   (35)   800     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  402 nodes

 203 str. conn. components

Path
    1  C BF483498Ta19P108G08P081F071R1_072.ab1   835 
   51    BF483498Ta19P108G08P081F071F1_072.ab1    16 
   63  C BF483498Ta19P108G08P081F071R1_072.ab1   773 
   71    BF483498Ta19P108G08P081F071F1_072.ab1    36 
  583  C BF483498Ta19P108G08P081F071R1_072.ab1   253 
  827    BF483498Ta19P108G08P081F071F1_072.ab1   792 
Contig length: old 871, new 871

Contig length: old 871, new 871
New start: 0