No. words: 1653; after pruning: 1627


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.5 (1,1:788)  769  0.00 0.00 0.00  BF483498Ta20P108G08P081F071F1_087.ab1        1   789 (43)  C BF483498Ta20P108G08P081F071R1_087.ab1   (32)   789     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  396 nodes

 200 str. conn. components

Path
    1  C BF483498Ta20P108G08P081F071R1_087.ab1   821 
   40    BF483498Ta20P108G08P081F071F1_087.ab1     8 
   60  C BF483498Ta20P108G08P081F071R1_087.ab1   762 
   64    BF483498Ta20P108G08P081F071F1_087.ab1    32 
  576  C BF483498Ta20P108G08P081F071R1_087.ab1   246 
  816    BF483498Ta20P108G08P081F071F1_087.ab1   784 
Contig length: old 864, new 864

Contig length: old 864, new 864
New start: 0