No. words: 1635; after pruning: 1609


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.0 (1,1:787)  762  0.00 0.00 0.13  BF483498Ta21P108G08P081F071F1_070.ab1        1   788 (8)  C BF483498Ta21P108G08P081F071R1_070.ab1   (52)   787     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  390 nodes

 197 str. conn. components

Path
    1  C BF483498Ta21P108G08P081F071R1_070.ab1   839 
   56    BF483498Ta21P108G08P081F071F1_070.ab1     4 
   80  C BF483498Ta21P108G08P081F071R1_070.ab1   760 
   84    BF483498Ta21P108G08P081F071F1_070.ab1    32 
  136  C BF483498Ta21P108G08P081F071R1_070.ab1   704 
  140    BF483498Ta21P108G08P081F071F1_070.ab1    88 
  172  C BF483498Ta21P108G08P081F071R1_070.ab1   668 
  176    BF483498Ta21P108G08P081F071F1_070.ab1   124 
  596  C BF483498Ta21P108G08P081F071R1_070.ab1   244 
  832    BF483498Ta21P108G08P081F071F1_070.ab1   781 
Contig length: old 847, new 847

Contig length: old 847, new 847
New start: 0