No. words: 1658; after pruning: 1632


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.8 (1,1:785)  756  0.25 0.13 0.00  BF483498Ta22P108G08P081F071F1_085.ab1        1   786 (45)  C BF483498Ta22P108G08P081F071R1_085.ab1   (40)   787     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  386 nodes

 195 str. conn. components

Path
    1  C BF483498Ta22P108G08P081F071R1_085.ab1   827 
   59    BF483498Ta22P108G08P081F071F1_085.ab1    18 
   67  C BF483498Ta22P108G08P081F071R1_085.ab1   761 
   71    BF483498Ta22P108G08P081F071F1_085.ab1    30 
   75  C BF483498Ta22P108G08P081F071R1_085.ab1   753 
   91    BF483498Ta22P108G08P081F071F1_085.ab1    50 
   95  C BF483498Ta22P108G08P081F071R1_085.ab1   733 
   99    BF483498Ta22P108G08P081F071F1_085.ab1    58 
  119  C BF483498Ta22P108G08P081F071R1_085.ab1   709 
  129    BF483498Ta22P108G08P081F071F1_085.ab1    88 
  585  C BF483498Ta22P108G08P081F071R1_085.ab1   243 
  797    BF483498Ta22P108G08P081F071F1_085.ab1   756 
  801  C BF483498Ta22P108G08P081F071R1_085.ab1    27 
  821    BF483498Ta22P108G08P081F071F1_085.ab1   780 
Contig length: old 872, new 872

Contig length: old 872, new 872
New start: 0