No. words: 1734; after pruning: 1708


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.1 (1,1:760)  743  0.79 0.00 0.00  BF484268Ld03P114H02P114C061F1_065.ab1        1   761 (98)  C BF484268Ld03P114H02P114C061R1_065.ab1   (114)   761     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  372 nodes

 188 str. conn. components

Path
    1  C BF484268Ld03P114H02P114C061R1_065.ab1   875 
  122    BF484268Ld03P114H02P114C061F1_065.ab1     8 
  126  C BF484268Ld03P114H02P114C061R1_065.ab1   750 
  157    BF484268Ld03P114H02P114C061F1_065.ab1    43 
  185  C BF484268Ld03P114H02P114C061R1_065.ab1   691 
  201    BF484268Ld03P114H02P114C061F1_065.ab1    87 
  237  C BF484268Ld03P114H02P114C061R1_065.ab1   639 
  249    BF484268Ld03P114H02P114C061F1_065.ab1   135 
  685  C BF484268Ld03P114H02P114C061R1_065.ab1   191 
  701    BF484268Ld03P114H02P114C061F1_065.ab1   587 
  709  C BF484268Ld03P114H02P114C061R1_065.ab1   167 
  717    BF484268Ld03P114H02P114C061F1_065.ab1   603 
  721  C BF484268Ld03P114H02P114C061R1_065.ab1   155 
  741    BF484268Ld03P114H02P114C061F1_065.ab1   627 
  745  C BF484268Ld03P114H02P114C061R1_065.ab1   131 
  765    BF484268Ld03P114H02P114C061F1_065.ab1   651 
  769  C BF484268Ld03P114H02P114C061R1_065.ab1   107 
  773    BF484268Ld03P114H02P114C061F1_065.ab1   659 
  793  C BF484268Ld03P114H02P114C061R1_065.ab1    83 
  797    BF484268Ld03P114H02P114C061F1_065.ab1   683 
  805  C BF484268Ld03P114H02P114C061R1_065.ab1    71 
  825    BF484268Ld03P114H02P114C061F1_065.ab1   711 
  860  C BF484268Ld03P114H02P114C061R1_065.ab1    16 
  864    BF484268Ld03P114H02P114C061F1_065.ab1   750 
  868  C BF484268Ld03P114H02P114C061R1_065.ab1     8 
  872    BF484268Ld03P114H02P114C061F1_065.ab1   758 
Contig length: old 973, new 973

Contig length: old 973, new 973
New start: 0