No. words: 1048; after pruning: 1022


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 6.1 (1,1:364)  357  0.00 0.00 0.00  BF484268Ld06P027F03P027F091F1_058.ab1        5   363 (171)  C BF484268Ld06P027F03P027F091R1_058.ab1   (153)   361     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  182 nodes

 93 str. conn. components

Path
    1  C BF484268Ld06P027F03P027F091R1_058.ab1   514 
  257    BF484268Ld06P027F03P027F091F1_058.ab1   108 
  261  C BF484268Ld06P027F03P027F091R1_058.ab1   254 
  269    BF484268Ld06P027F03P027F091F1_058.ab1   120 
  309  C BF484268Ld06P027F03P027F091R1_058.ab1   206 
  321    BF484268Ld06P027F03P027F091F1_058.ab1   172 
  341  C BF484268Ld06P027F03P027F091R1_058.ab1   174 
  353    BF484268Ld06P027F03P027F091F1_058.ab1   204 
Contig length: old 683, new 683

Contig length: old 683, new 683
New start: 0