No. words: 1054; after pruning: 1028


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 7.5 (1,1:367)  365  0.00 0.00 0.00  BF484268Ld08P027F03P027F091F1_054.ab1        1   367 (170)  C BF484268Ld08P027F03P027F091R1_054.ab1   (149)   368     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  184 nodes

 94 str. conn. components

Path
    1  C BF484268Ld08P027F03P027F091R1_054.ab1   517 
  266    BF484268Ld08P027F03P027F091F1_054.ab1   117 
  306  C BF484268Ld08P027F03P027F091R1_054.ab1   212 
  318    BF484268Ld08P027F03P027F091F1_054.ab1   169 
Contig length: old 686, new 686

Contig length: old 686, new 686
New start: 0