No. words: 1716; after pruning: 1690


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.1 (1,1:757)  740  0.79 0.00 0.00  BF484268Ld11P114H02P114C061F1_066.ab1        1   758 (132)  C BF484268Ld11P114H02P114C061R1_066.ab1   (68)   758     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  370 nodes

 187 str. conn. components

Path
    1  C BF484268Ld11P114H02P114C061R1_066.ab1   826 
   76    BF484268Ld11P114H02P114C061F1_066.ab1     8 
   84  C BF484268Ld11P114H02P114C061R1_066.ab1   743 
  111    BF484268Ld11P114H02P114C061F1_066.ab1    43 
  115  C BF484268Ld11P114H02P114C061R1_066.ab1   712 
  123    BF484268Ld11P114H02P114C061F1_066.ab1    55 
  143  C BF484268Ld11P114H02P114C061R1_066.ab1   684 
  147    BF484268Ld11P114H02P114C061F1_066.ab1    79 
  195  C BF484268Ld11P114H02P114C061R1_066.ab1   632 
  203    BF484268Ld11P114H02P114C061F1_066.ab1   135 
  247  C BF484268Ld11P114H02P114C061R1_066.ab1   580 
  255    BF484268Ld11P114H02P114C061F1_066.ab1   187 
  587  C BF484268Ld11P114H02P114C061R1_066.ab1   240 
  643    BF484268Ld11P114H02P114C061F1_066.ab1   575 
  699  C BF484268Ld11P114H02P114C061R1_066.ab1   128 
  719    BF484268Ld11P114H02P114C061F1_066.ab1   651 
  743  C BF484268Ld11P114H02P114C061R1_066.ab1    84 
  747    BF484268Ld11P114H02P114C061F1_066.ab1   679 
  759  C BF484268Ld11P114H02P114C061R1_066.ab1    68 
  779    BF484268Ld11P114H02P114C061F1_066.ab1   711 
Contig length: old 958, new 958

Contig length: old 958, new 958
New start: 0