No. words: 1544; after pruning: 1518


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.8 (1,1:722)  699  0.83 0.00 0.14  BF484268Tu02P114H02P114B061F1_025.ab1        1   723 (52)  C BF484268Tu02P114H02P114B061R1_025.ab1   (47)   722     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  350 nodes

 177 str. conn. components

Path
    1  C BF484268Tu02P114H02P114B061R1_025.ab1   769 
   67    BF484268Tu02P114H02P114B061F1_025.ab1    20 
   71  C BF484268Tu02P114H02P114B061R1_025.ab1   699 
   91    BF484268Tu02P114H02P114B061F1_025.ab1    44 
   95  C BF484268Tu02P114H02P114B061R1_025.ab1   675 
  103    BF484268Tu02P114H02P114B061F1_025.ab1    56 
  107  C BF484268Tu02P114H02P114B061R1_025.ab1   663 
  115    BF484268Tu02P114H02P114B061F1_025.ab1    68 
  119  C BF484268Tu02P114H02P114B061R1_025.ab1   651 
  127    BF484268Tu02P114H02P114B061F1_025.ab1    80 
  143  C BF484268Tu02P114H02P114B061R1_025.ab1   627 
  147    BF484268Tu02P114H02P114B061F1_025.ab1   100 
  163  C BF484268Tu02P114H02P114B061R1_025.ab1   607 
  171    BF484268Tu02P114H02P114B061F1_025.ab1   124 
  175  C BF484268Tu02P114H02P114B061R1_025.ab1   595 
  187    BF484268Tu02P114H02P114B061F1_025.ab1   140 
  419  C BF484268Tu02P114H02P114B061R1_025.ab1   351 
  651    BF484268Tu02P114H02P114B061F1_025.ab1   604 
  659  C BF484268Tu02P114H02P114B061R1_025.ab1   111 
  675    BF484268Tu02P114H02P114B061F1_025.ab1   628 
  748  C BF484268Tu02P114H02P114B061R1_025.ab1    23 
  764    BF484268Tu02P114H02P114B061F1_025.ab1   717 
Contig length: old 821, new 822

Contig length: old 822, new 822
New start: 0