No. words: 1275; after pruning: 1249


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.6 (1,1:798)  467  0.00 0.00 0.00  BF484475As02P081H01P081H071F1_041.ab1      156   631 (0)  C BF484475As02P081H01P081H071R1_041.ab1   (0)   644   169 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1    BF484475As02P081H01P081H071F1_041.ab1     1 
  527  C BF484475As02P081H01P081H071R1_041.ab1   273 
  531    BF484475As02P081H01P081H071F1_041.ab1   531 
  543  C BF484475As02P081H01P081H071R1_041.ab1   257 
  547    BF484475As02P081H01P081H071F1_041.ab1   547 
  555  C BF484475As02P081H01P081H071R1_041.ab1   245 
  575    BF484475As02P081H01P081H071F1_041.ab1   575 
  579  C BF484475As02P081H01P081H071R1_041.ab1   221 
Contig length: old 799, new 799

Contig length: old 799, new 799
New start: 0