No. words: 1499; after pruning: 1459


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.4 (1,1:817)  659  0.44 0.00 0.00  BF484475At01P081H01P081H071F1_039.ab1       86   766 (0)  C BF484475At01P081H01P081H071R1_039.ab1   (0)   733    53 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  332 nodes

 168 str. conn. components

Path
    1    BF484475At01P081H01P081H071F1_039.ab1     1 
  309  C BF484475At01P081H01P081H071R1_039.ab1   510 
  313    BF484475At01P081H01P081H071F1_039.ab1   313 
  409  C BF484475At01P081H01P081H071R1_039.ab1   410 
  425    BF484475At01P081H01P081H071F1_039.ab1   425 
  461  C BF484475At01P081H01P081H071R1_039.ab1   358 
  501    BF484475At01P081H01P081H071F1_039.ab1   501 
  505  C BF484475At01P081H01P081H071R1_039.ab1   314 
Contig length: old 818, new 818

Contig length: old 818, new 818
New start: 0