No. words: 1761; after pruning: 1735


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 17.8 (1,1:834)  808  0.12 0.12 0.12  BF484475Ld02P081H01P081H071F1_059.ab1        1   834 (44)  C BF484475Ld02P081H01P081H071R1_059.ab1   (48)   835     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  408 nodes

 206 str. conn. components

Path
    1  C BF484475Ld02P081H01P081H071R1_059.ab1   883 
   52    BF484475Ld02P081H01P081H071F1_059.ab1     4 
   87  C BF484475Ld02P081H01P081H071R1_059.ab1   796 
   91    BF484475Ld02P081H01P081H071F1_059.ab1    43 
  631  C BF484475Ld02P081H01P081H071R1_059.ab1   252 
  735    BF484475Ld02P081H01P081H071F1_059.ab1   687 
  739  C BF484475Ld02P081H01P081H071R1_059.ab1   144 
  863    BF484475Ld02P081H01P081H071F1_059.ab1   815 
Contig length: old 926, new 926

Contig length: old 926, new 926
New start: 0 
S Change at: 869; seg lengths: entry 1, contig 1