No. words: 1640; after pruning: 1614


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.7 (1,1:811)  789  0.12 0.00 0.00  BF484475Ld09P081H01P081H071F1_084.ab1        1   804 (0)  C BF484475Ld09P081H01P081H071R1_084.ab1   (24)   812     9 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  400 nodes

 202 str. conn. components

Path
    1  C BF484475Ld09P081H01P081H071R1_084.ab1   836 
   29    BF484475Ld09P081H01P081H071F1_084.ab1     5 
  277  C BF484475Ld09P081H01P081H071R1_084.ab1   560 
  389    BF484475Ld09P081H01P081H071F1_084.ab1   365 
  397  C BF484475Ld09P081H01P081H071R1_084.ab1   440 
Contig length: old 836, new 836

Contig length: old 836, new 836
New start: 0