No. words: 953; after pruning: 927


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.4 (1,1:311)  299  0.00 0.32 0.00  BF484958Ld01P027G03P027G091F1_083.ab1        1   312 (153)  C BF484958Ld01P027G03P027G091R1_083.ab1   (175)   313     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  156 nodes

 80 str. conn. components

Path
    1  C BF484958Ld01P027G03P027G091R1_083.ab1   488 
  301    BF484958Ld01P027G03P027G091F1_083.ab1   125 
  317  C BF484958Ld01P027G03P027G091R1_083.ab1   172 
  333    BF484958Ld01P027G03P027G091F1_083.ab1   157 
Contig length: old 641, new 641

Contig length: old 641, new 641
New start: 0