No. words: 915; after pruning: 889


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.2 (1,1:270)  244  2.21 0.00 0.00  BF484958Ld04P027G03P027G091F1_092.ab1        1   271 (209)  C BF484958Ld04P027G03P027G091R1_092.ab1   (164)   271     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  126 nodes

 65 str. conn. components

Path
    1  C BF484958Ld04P027G03P027G091R1_092.ab1   435 
  277    BF484958Ld04P027G03P027G091F1_092.ab1   113 
Contig length: old 644, new 644

Contig length: old 644, new 644
New start: 0